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#seq#bioinformatics#python

Read a paper: Seq - a high-performance language for bioinformatics

Vivek Haldar

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  • Linked in the descriptionDOI 10.1145/3360551

Intermediate. Assumes working knowledge.

758 views7 years ago1 recommendation

Programming languagesSystems programmingLanguage design and type systemsPerformance and optimization

Vivek Haldar reviews a paper introducing Seq, a high-performance, Python-compatible programming language tailored for bioinformatics applications.

Ariya Shajii, Ibrahim Numanagić, Riyadh Baghdadi, Bonnie Berger, and Saman Amarasinghe. 2019. Seq: a high-performance language for bioinformatics. Proc. ACM Program. Lang. 3, OOPSLA, Article 125 (October 2019), 29 pages. DOI: doi.org/10.1145/3360551

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What people say. Recommended as a concise summary of the Seq programming language design and performance.

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Read a paper: Seq - a high-performance language for bioinformatics