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#anton#moleculardynamics#asic

Anton: A Special-Purpose Machine That Achieves a Hundred-Fold Speedup in Biomolecular Simulations

NC State

15K subscribers • 1 video on Hallway

YouTube
  • Recommended by 1 person: 1 on Hacker News.
  • Presented by David Shaw, founder of D. E. Shaw Research

Advanced. Deep dive for people who know the field.

11K views14 years ago1 recommendation

HardwareSystems programmingCPUs and computer architecturePerformance and optimization

David Shaw explains the architecture and design of Anton, a special-purpose supercomputer designed to speed up molecular dynamics simulations.

SPEAKER & AFFILIATION: David Shaw, D. E. Shaw Research DESCRIPTION & LINK: This lecture has been videocast from the Computer Science Department at UNC. The abstract of this lecture and a brief speaker biography is available at research.csc.ncsu.edu/colloquia/seminar-post.php?id=428 For a complete transcript of this lecture, go to ncsu.edu/youtube/transcript/shaw-transcript.rtf

Why it's here

1 person recommends this

What people say. Recommended as an accessible and fascinating explanation of custom hardware design for molecular dynamics simulations.

max_on Hacker News • Recommends

On “A Primer on Molecular Dynamics”

There is brilliant video by the hedge fund manager DE Shaw about molecular dynamics simulation. Its very accessible and I found it very interesting — link to this video

cmaon Hacker News • Mentions

On “AMD launches Kaveri processors aimed at starting a computing revolution”

I'm not giving you what you want, but here's a visual example of using a computational microscope to understand how drug actually works and finds its binding site: link to this video If you can't see a difference between that and say, X-Ray crystallography then well..

conformiston Hacker News • Mentions

On “David Shaw vs. Seymour Papert Debate (1995) [video]”

There are also some more recent academic talks of his on youtube, mostly focused on his bio-informatics research. E.g. link to this video

max_on Hacker News • Mentions

On “Ask HN: What's a promising area to work on in 2024 -ideally not crowded already?”

…o start would be exploring abandoned AI strategies like Genetics Algorithms & Markov Logic >What are some practical applications of complex systems? - Modeling Financial Markets 1 - Drug discovery via Molecular Dynamics Simulations 2 - Urban Planning 3 - Modeling Epidemics 4 - Cosmology - Computer Graphics - Much more .... 1: link 2: link to this video 3: link 4: link If interested, subscribe to these podcasts. 1: Simplifying Complexity: link 2: Complexity: link…